Spotlight:
Interview With Prof. Abidi
taking university education in Science & Engineering to new heights in Pakistan.
 
Foresight:
Prof. Harry Gray of Caltech
talks about his passion for science and explains why you should study science at the SSE.
 
News:
Professor Khalid Aziz
received the Honorary Doctor of Laws Degree from the University of Calgary on June 9, 2008.
 
 
Life Sciences Research
 

HEC-BC Funded Link on Bio-Nanotechnology

Partner Institutions:

Pakistan: LUMS SSE (Drs. S. Khan, K. Afridi, T. Butt)
U.K: National Institute for Medical Research (Drs J. Molloy, C. Veigel, D.R. Trentham)

Bio-nanotechnology is a multidisciplinary field that uses nanoscale measurement methodologies to
solve medical problems. We are investigating lesions in the motor protein, myosinVI, that cause
Usher's syndrome (a combined hearing/vision disorder). This disorder is prevalent in Pakistani populations from the Saraiki belt. Actin filaments rendered fluorescent by chemical modification are
imaged in the optical microscope by cameras with required photon sensitivity and spatial resolution and their translocation over a bed of myosin molecules adsorbed onto coverglass recorded (Movie 1). We have found that myosin motors drive long-range orientation of actin filaments using this methods (see Butt et al. 2010). Information from such in vitro motility assays is combined with information on cellular functions of the mysoins carrying the mutant lesions and fused with variants of green flurescent protein. A major focus of our recent work has been the development of computer algorithms for quantitative measures and simulations of intracellular movements as well as in vitro motility of the tagged myosin molecules in real time. The imaging effort is combined with molecular modeling studies of the effect of the altered amino acid residues on myosinVI atomic structure (Figure 1) shows head domain of the myosin VI molecule
with ADP (centre) and one residue (216E) displayed in space-filling CPK representation).and ongoing clinical diagnoses of the affected Pakistani families carrying the myosin VI lesions.

Trainees
Past: Ms Asma Amjad. Ph.D Program in Cellular Neuroscience. SISSA. ITALY
Mr Ahmad Humayun. MS Program in Computer Science. University College, London. UK
Present: Ms Mayida Azhar, Mr Muhammad Sheraz

 
Publications
 
2010

Tariq Butt, Tabish Mufti, Ahmad Humayun, Peter B Rosenthal, Sohaib Khan, Shahid Khan and Justin Molloy. Myosin motors drive long-range alignment of actin filaments. J. Biol. Chem. 285,4964-74

   
2009 Shahid Khan, Jun Xie and Mubarak Shah, “Automatic Tracking of Escherichia Coli In
Phase-Contrast Microscopy Video”. IEEE Trans. Biomed. Engin. 56:390-99
   
  Shahid Khan, Asim Karim and Shaheryar Iqbal, “Helicobacter urease: Niche construction
at the single molecule level”. J. Biosci. 34:503-11
   
  Shahid Khan, Mark A. DePristo, Lynne Chang, Ronald D. Vale and Karen Lipkowa,
“Introducing simulated cellular architecture to the quantitative analysis of fluorescent
microscopy”. Prog. Biophys. Mol. Biol.100:25-32